The detailed information of tRNA gene sequence


Sequence ID>WENV170404271
Genome IDCEUF01273203
Search identical group
Phylum/Class[CEUF] marine metagenome genome assembly TARA_138_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1255
End posion on genome 1167
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atcatttaat
tRNA gene sequence 
GGAGAGTTGGCAGAGCGGTAATGCAGCGGATTGCTAATCCGTCGTGATGTAACAATCACG
CGCGAGTTCAAATCTCGCACTCTCCGCTA
Downstream region at tRNA end position 
ggaagaataa
Secondary structure (Cloverleaf model)
>WENV170404271	Ser	GCT
                   t      GCTA ggaagaataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C G C T C     A
        G A        G      | | | | |     A
      C     G A C G       G C G A G     C
      G       | | |                 T T
      G     A T G C
        T A        A     CGTGATGTAACAATCACGC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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