The detailed information of tRNA gene sequence


Sequence ID>WENV170404609
Genome IDCEUG01016286
Search identical group
Phylum/Class[CEUG] marine metagenome genome assembly TARA_128_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 487
End posion on genome 411
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caacctctgt
tRNA gene sequence 
CGCGGGGTGGAGCAGCCAGGTAGCTCGTCAGGCTCATAACCTGAAGGTCAGAGGTTCAAA
TCCTCTCCCCGCAACCA
Downstream region at tRNA end position 
attcatttat
Secondary structure (Cloverleaf model)
>WENV170404609	Met	CAT
                   t      ACCA attcatttat
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
      C G A        G      | | | | |     A
    C       C G A G       A G A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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