The detailed information of tRNA gene sequence


Sequence ID>WENV170405337
Genome IDCEUG01090657
Search identical group
Phylum/Class[CEUG] marine metagenome genome assembly TARA_128_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1356
End posion on genome 1281
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caagaatacc
tRNA gene sequence 
GCACGGATAGCAAAGCTTGGCCATGCCGGGGATTGCAAATCCTCTTACCTGGGTTCAAAT
CCCAGTCCGTGCTCCA
Downstream region at tRNA end position 
aaaatccaat
Secondary structure (Cloverleaf model)
>WENV170405337	Cys	GCA
                   c      TCCA aaaatccaat
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      C G A        A      | | | | |     A
    T       A A C G       C T G G G     C
    T         | | |                 T T
    G       A T G C
      G C C        C     TTAC
                    G - C
                    G + T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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