The detailed information of tRNA gene sequence


Sequence ID>WENV170406047
Genome IDCEUG01263022
Search identical group
Phylum/Class[CEUG] marine metagenome genome assembly TARA_128_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 592
End posion on genome 687
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aatataatca
tRNA gene sequence 
GGAGAGTTGAGGGTGCCTGGTGGCCCCCGCGGTCTTCAAAACCGTTGTCGGTCCGTGAAC
GGGCCGAGCTAGGTTCGATTCCTAGCCTCTCCGCCA
Downstream region at tRNA end position 
ctttattcag
Secondary structure (Cloverleaf model)
>WENV170406047	SeC(p)	TCA
                   a      GCCA ctttattcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T   C          T T
                    T     G A T C C     A
    C C G T        G      | | | | |     G
  T         G G G A       C T A G G     C
  G         | | |                   T T
  G         C C C C
    T G G          C     TGTCGGTCCGTGAACGGGCCGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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