The detailed information of tRNA gene sequence


Sequence ID>WENV170407354
Genome IDCEUH01129572
Search identical group
Phylum/Class[CEUH] marine metagenome genome assembly TARA_137_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 374
End posion on genome 298
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atccatcaat
tRNA gene sequence 
GGCGGGATAGCTCAGTTGGTTAGAGCACGGGACTCATAAGCCCGGGGTCGGCAGTTCAAA
TCTGCCTCCCGCTACCA
Downstream region at tRNA end position 
aaaacatgaa
Secondary structure (Cloverleaf model)
>WENV170407354	Met	CAT
                   t      ACCA aaaacatgaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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