The detailed information of tRNA gene sequence


Sequence ID>WENV170408175
Genome IDCEUI01006053
Search identical group
Phylum/Class[CEUI] marine metagenome genome assembly TARA_125_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 72596
End posion on genome 72508
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acaccatttt
tRNA gene sequence 
GGAAGCGTGTCCGAGAGGCCGAAGGAGCACGATTGGAAATCGTGTGTGGTTCATAGCTAC
CGTAGGTTCGAATCCTACCGCTTCCGCCA
Downstream region at tRNA end position 
tatatgggat
Secondary structure (Cloverleaf model)
>WENV170408175	Ser	GGA
                   t      GCCA tatatgggat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A T C C     A
      A G A        G      | | | | |     G
    G       G C C T       G T A G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TGTGGTTCATAGCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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