The detailed information of tRNA gene sequence


Sequence ID>WENV170408265
Genome IDCEUI01011532
Search identical group
Phylum/Class[CEUI] marine metagenome genome assembly TARA_125_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1196
End posion on genome 1270
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ataataatat
tRNA gene sequence 
GGGGTCGTAGCTCAATTGGTTAGAGTACCGGACTGTCGATCCGGTGGTTGTGGGTTCAAG
TCCCATCGGCCTCGCtt
Downstream region at tRNA end position 
tgtatcagcc
Secondary structure (Cloverleaf model)
>WENV170408265	Asp	GTC
                   t      GCtt tgtatcagcc
                     G - C
                     G + T
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T A C C C     A
      T A A        A      + | | | |     A
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     TGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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