The detailed information of tRNA gene sequence


Sequence ID>WENV170409069
Genome IDCEUI01144946
Search identical group
Phylum/Class[CEUI] marine metagenome genome assembly TARA_125_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3692
End posion on genome 3600
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttgttgattc
tRNA gene sequence 
GGGTAGTTGACTGAGTGGCTGAAGGTGGTTGCCTGCTAAGTAACTGACCCCCGTCGAGGG
GGTCCGTAGGTTCGAATCCTACACTACCCGCCA
Downstream region at tRNA end position 
gtttcgcccg
Secondary structure (Cloverleaf model)
>WENV170409069	Ser	GCT
                   c      GCCA gtttcgcccg
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     T - A          T A
                    T     C A T C C     A
      T G A        G      | | | | |     G
    G       G T C A       G T A G G     C
    G         + | |                 T T
    C       A G G T
      T G A        G     TGACCCCCGTCGAGGGGGTCC
                    G - C
                    T - A
                    T - A
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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