The detailed information of tRNA gene sequence


Sequence ID>WENV170410092
Genome IDCEUJ01070999
Search identical group
Phylum/Class[CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 598
End posion on genome 522
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ccaaacttat
tRNA gene sequence 
GGACAAGTAGCTCAATTGGATAGAGCAACGGTCTTCTAAACCGTAGGTTCTGGGTTCGAG
TCCCAGCTTGTCTGCCA
Downstream region at tRNA end position 
tttttaatat
Secondary structure (Cloverleaf model)
>WENV170410092	Arg	TCT
                   t      GCCA tttttaatat
                     G + T
                     G - C
                     A - T
                     C - G
                     A - T
                     A - T
                     G - C          T G
                    T     G A C C C     A
      T A A        A      | | | | |     G
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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