The detailed information of tRNA gene sequence


Sequence ID>WENV170410310
Genome IDCEUJ01089258
Search identical group
Phylum/Class[CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 145
End posion on genome 230
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcgtccgtct
tRNA gene sequence 
GCCGAGGTCGCATAGCCTGGTATTGCGCATGACTGGAAATCATGTGGGATTTTCCCTCCG
GAGTTCAAATCTCCGTCTCGGCGCCA
Downstream region at tRNA end position 
aaactcctcc
Secondary structure (Cloverleaf model)
>WENV170410310	Ser	GGA
                   t      GCCA aaactcctcc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G C C T C     A
      C G A        C      | | | | |     A
    C       T A C G       C G G A G     C
    T         | | |                 T T
    G       T T G C
      G T A        G     TGGGATTTTCCCTC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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