The detailed information of tRNA gene sequence


Sequence ID>WENV170410922
Genome IDCEUJ01146880
Search identical group
Phylum/Class[CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 348
End posion on genome 438
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttaattcttt
tRNA gene sequence 
GGTAGGTTGGGAGAGTCTGGTTTAATCCACCAACTTGGAAAGTTGGCATACCGCTTTGGT
ATCATTGGTTCGAATCCAATACCTACCGCCA
Downstream region at tRNA end position 
tttaaattaa
Secondary structure (Cloverleaf model)
>WENV170410922	Ser	GGA
                   t      GCCA tttaaattaa
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     T A A C C     A
    C T G A        G      | | | | |     G
  T         G A G G       A T T G G     C
  G           | | |                 T T
  G         A T C C
    T T T A        A     CATACCGCTTTGGTATC
                    C - G
                    C - G
                    A - T
                    A - T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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