The detailed information of tRNA gene sequence


Sequence ID>WENV170411327
Genome IDCEUJ01175436
Search identical group
Phylum/Class[CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 386
End posion on genome 305
Amino Acid Ser
Anticodon AGA
Upstream region at tRNA start position 
gtttttataa
tRNA gene sequence 
GACAGTGTGGCCGAGTGGTTAAGGCGGTAGACTAGAAATCTACTGGGCTCTGCCCGCGCA
GGTTCAAATCCTGTCGCTGTCGaat
Downstream region at tRNA end position 
ttatatatag
Secondary structure (Cloverleaf model)
>WENV170411327	Ser	AGA
                   a      Gaat ttatatatag
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     A
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGCTCTGCCCGC
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    A G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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