The detailed information of tRNA gene sequence


Sequence ID>WENV170411634
Genome IDCEUJ01255960
Search identical group
Phylum/Class[CEUJ] marine metagenome genome assembly TARA_125_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 215
End posion on genome 302
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttgttgtgc
tRNA gene sequence 
GGAGAGTTGACCGAGCGGTCGAAGGTGGTCGCCTGGAACGCGGCTGTGGGGCAACCCACC
GAGGGTTCGAATCCCTCACTCTCCTCCA
Downstream region at tRNA end position 
tttttttaag
Secondary structure (Cloverleaf model)
>WENV170411634	Ser	GGA
                   c      TCCA tttttttaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    T       A G G T
      C G A        G     TGTGGGGCAACCCACC
                    G - C
                    T + G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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