The detailed information of tRNA gene sequence


Sequence ID>WENV170412524
Genome IDCEUK01036611
Search identical group
Phylum/Class[CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 181
End posion on genome 108
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cacaatctgc
tRNA gene sequence 
GGCGAGTTGGCGGAGTGGTGACGCAGCGGATTGCAAATCCGTGTACACCGGTTCGATTCC
GGTACTCGCCTCCA
Downstream region at tRNA end position 
aaaatccatt
Secondary structure (Cloverleaf model)
>WENV170412524	Cys	GCA
                   c      TCCA aaaatccatt
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     T - A          T T
                    T     T G G C C     A
        G A        G      | | | | |     G
      T     G G C G       A C C G G     C
      G       | | |                 T T
      G     A C G C
        T G        A     GTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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