The detailed information of tRNA gene sequence


Sequence ID>WENV170413543
Genome IDCEUK01117837
Search identical group
Phylum/Class[CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 170
End posion on genome 99
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tatataagaa
tRNA gene sequence 
GTCGTCATAGTATAACGGTTAGTATACCTGCCTGTCACGCAGGTGGCCTGGGTTCGACTC
CCAGTGATGGCGtac
Downstream region at tRNA end position 
atttaaatat
Secondary structure (Cloverleaf model)
>WENV170413543	Asp	GTC
                   a      Gtac atttaaatat
                     G - C
                     T + G
                     C - G
                     G + T
                     T - A
                     C - G
                     A - T          T C
                    T     G A C C C     A
      C A A        A      | | | | |     G
    G       T A T G       C T G G G     C
    G       + | | +                 T T
    T       G T A T
      T A          A     TGGC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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