The detailed information of tRNA gene sequence


Sequence ID>WENV170414129
Genome IDCEUK01174262
Search identical group
Phylum/Class[CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 352
End posion on genome 278
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agaccttttT
tRNA gene sequence 
GACAGATTAGCTCAGTGGTTAGAGCGCCAGATTCATGACCTGGAGGTCGCTGGTTCAATT
CCAGTATTTGTCAAaa
Downstream region at tRNA end position 
attgattttt
Secondary structure (Cloverleaf model)
>WENV170414129	Met	CAT
                   T      AAaa attgattttt
                     G - C
                     A - T
                     C - G
                     A - T
                     G + T
                     A - T
                     T - A          T T
                    T     T G A C C     A
      T G A        A      + | | | |     A
    G       C T C G       G C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A   C
                  T       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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