The detailed information of tRNA gene sequence


Sequence ID>WENV170414485
Genome IDCEUK01231792
Search identical group
Phylum/Class[CEUK] marine metagenome genome assembly TARA_125_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 220
End posion on genome 314
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aatcttactt
tRNA gene sequence 
GGAAGGGAATCGCGGCCGGTGTCGCGCGCGGTCTTCAAAACCGTTGGGGGACGTCAGACG
GTCCCGGTGGGTTCGACTCCCACTCTCTTCCGCCA
Downstream region at tRNA end position 
aaccttcatt
Secondary structure (Cloverleaf model)
>WENV170414485	SeC(p)	TCA
                   t      GCCA aaccttcatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C
                     A - T          T C
                    A     C A C C C     A
      C C G        T      | | | | |     G
    G       G C G C       G T G G G     C
    G       | | | |                 T T
    T       C G C G
      G T          C     TGGGGGACGTCAGACGGTCCCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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