The detailed information of tRNA gene sequence


Sequence ID>WENV170419297
Genome IDCEUM01116555
Search identical group
Phylum/Class[CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2366
End posion on genome 2290
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaaccataat
tRNA gene sequence 
GGCGTGGTAGCTCAGTTGGTTAGAGCGCAGGATTCATAACCCTGAGGTCGGCAGTTCAAA
TCTGCCTCACGCTACCA
Downstream region at tRNA end position 
gttagaaaag
Secondary structure (Cloverleaf model)
>WENV170419297	Met	CAT
                   t      ACCA gttagaaaag
                     G + T
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C
                     G + T          T A
                    T     C C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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