The detailed information of tRNA gene sequence


Sequence ID>WENV170419370
Genome IDCEUM01122211
Search identical group
Phylum/Class[CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 437
End posion on genome 349
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttgccgtctc
tRNA gene sequence 
GGAGGTTTGGCAGAGTTGGTCGATTGCACCGGTCTTGAAAACCGGCGTGCCGCAAGGTAC
CGGGGGTTCGAATCCCTCAGCCTCCGCCA
Downstream region at tRNA end position 
agaaagtgtc
Secondary structure (Cloverleaf model)
>WENV170419370	Ser	TGA
                   c      GCCA agaaagtgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     T - A          T A
                    T     C T C C C     A
    T T G A        G      | + | | |     G
  G         G A C G       G G G G G     C
  G         + | | |                 T T
  T         T T G C
    C G A          A     CGTGCCGCAAGGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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