The detailed information of tRNA gene sequence


Sequence ID>WENV170419474
Genome IDCEUM01129168
Search identical group
Phylum/Class[CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 480
End posion on genome 556
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ataactaaaa
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAAACCGCTCATAACGGTTTGGTCGTAGGTTCGAG
TCCTACCGGGCCCACCA
Downstream region at tRNA end position 
tactcacttt
Secondary structure (Cloverleaf model)
>WENV170419474	Met	CAT
                   a      ACCA tactcacttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    A - T
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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