The detailed information of tRNA gene sequence


Sequence ID>WENV170419579
Genome IDCEUM01133167
Search identical group
Phylum/Class[CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 29114
End posion on genome 29019
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gacgctcgtt
tRNA gene sequence 
GGAAGAGATTCGTTCCCCGGTGGGGCGCCCGGTCTTCAAAACCGGTGAGGGGCGTTAGAC
GTCCCTGGTGGGTTCGACTCCCACTCTTTTCCGCCA
Downstream region at tRNA end position 
gttttcccga
Secondary structure (Cloverleaf model)
>WENV170419579	SeC(p)	TCA
                   t      GCCA gttttcccga
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     A - T
                     G - C
                     A - T          T C
                    T     C A C C C     A
      C C C        T      | | | | |     G
    C       T T G C       G T G G G     C
    G       + + | |                 T T
    G       G G C G
      T G G        C     TGAGGGGCGTTAGACGTCCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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