The detailed information of tRNA gene sequence


Sequence ID>WENV170419735
Genome IDCEUM01137054
Search identical group
Phylum/Class[CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 476
End posion on genome 574
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ggggatctac
tRNA gene sequence 
GGAGGCGGCTGGTTCACTGGTGTGGCCCCCGGTCTTCAAAACCGGTGTGGGGTAGCCTTG
CGCGTCCCGGGCGGGTTCGATTCCCGTACGCTTCCGCCA
Downstream region at tRNA end position 
tttaggactg
Secondary structure (Cloverleaf model)
>WENV170419735	SeC(p)	TCA
                   c      GCCA tttaggactg
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     C - G
                     G - C
                     G   A          T T
                    C     T G C C C     A
      C A C        T      + | | | |     G
    T       T T G G       G C G G G     C
    G       + + | |                 T T
    G       G G C C
      T G T        C     TGTGGGGTAGCCTTGCGCGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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