The detailed information of tRNA gene sequence


Sequence ID>WENV170419948
Genome IDCEUM01215839
Search identical group
Phylum/Class[CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 167
End posion on genome 253
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaagaaacaa
tRNA gene sequence 
ATAAACGTTGCTGAGTGGTTTAAAGCGGTAGATTGCTAATCTATTAAATGTTTGACATTT
CGCAAGTTCGAATCTTGTCGTTTACTCtc
Downstream region at tRNA end position 
tgttttttat
Secondary structure (Cloverleaf model)
>WENV170419948	Ser	GCT
                   a      TCtc tgttttttat
                     A   C
                     T - A
                     A - T
                     A - T
                     A - T
                     C - G
                     G - C          T A
                    T     T G T T C     A
      T G A        T      + | | | |     G
    G       G T C G       G C A A G     C
    G         | | |                 T T
    T       A A G C
      T T A        G     TAAATGTTTGACATTTC
                    G + T
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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