The detailed information of tRNA gene sequence


Sequence ID>WENV170420002
Genome IDCEUM01233491
Search identical group
Phylum/Class[CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 179
End posion on genome 105
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttgattcatA
tRNA gene sequence 
GGCTAGATAGCATAATTGGTAATGCCTGAGGTTGCAAACCTTTTTAATGTCGGTTCAAGT
CCGGCTCTAGCTTTat
Downstream region at tRNA end position 
taatattcca
Secondary structure (Cloverleaf model)
>WENV170420002	Cys	GCA
                   A      TTat taatattcca
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T
                     G - C
                     A - T          T G
                    T     C G G C C     A
      T A A        A      | + | | |     A
    T       T A C G       G T C G G     C
    G       | | | |                 T T
    G       A T G C
      T A          C     TTAAT
                    T   T
                    G + T
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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