The detailed information of tRNA gene sequence


Sequence ID>WENV170420031
Genome IDCEUM01251025
Search identical group
Phylum/Class[CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 161
End posion on genome 87
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atttccatcg
tRNA gene sequence 
GGTCCTATAGCTCAGTTGGTTAGAGCACCTGACTCATAATCAGGGGGTCCATGGTTCGAG
CCCATGTGGGACCACat
Downstream region at tRNA end position 
ctaaaaccca
Secondary structure (Cloverleaf model)
>WENV170420031	Met	CAT
                   g      ACat ctaaaaccca
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          C G
                    T     G T A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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