The detailed information of tRNA gene sequence


Sequence ID>WENV170420121
Genome IDCEUM01283884
Search identical group
Phylum/Class[CEUM] marine metagenome genome assembly TARA_123_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 449
End posion on genome 375
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ataaaaactt
tRNA gene sequence 
GGGGTCTTGGCGTAATTGGGAACGCACCTGACTGGCAGTCAGGAGTTAGGAGTTCGATTC
TCCTAGACTCCACCA
Downstream region at tRNA end position 
cttagctatt
Secondary structure (Cloverleaf model)
>WENV170420121	Ala	GGC
                   t      ACCA cttagctatt
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     C - G
                     T - A          T T
                    T     T C C T C     A
      T A A        G      | | | | |     G
    T       T G C G       A G G A G     C
    G       | | | |                 T T
    G       A C G C
      G A          A     AGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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