The detailed information of tRNA gene sequence


Sequence ID>WENV170422958
Genome IDCEUN01240440
Search identical group
Phylum/Class[CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 376
End posion on genome 473
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gaaaaatagc
tRNA gene sequence 
GGGAATGAAAGGGGAACTGGTGTCCCTCGCGGACTTCAAATCCGTTGTTGCGTGCTAATC
CCACGCTGGGTGGGTTCGATTCCCACACATTCCCGCCA
Downstream region at tRNA end position 
aaaaaagaac
Secondary structure (Cloverleaf model)
>WENV170422958	SeC(p)	TCA
                   c      GCCA aaaaaagaac
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     A   A          T T
                    A     C A C C C     A
      C A A        A      | | | | |     G
    T       G G G G       G T G G G     C
    G       | | | +                 T T
    G       C C C T
      T G T        C     TGTTGCGTGCTAATCCCACGCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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