The detailed information of tRNA gene sequence


Sequence ID>WENV170423098
Genome IDCEUN01303485
Search identical group
Phylum/Class[CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 470
End posion on genome 379
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tacgcgcctg
tRNA gene sequence 
GGAGAGGTACCGAAGCGGTCACAACGGCACCGACTCGAAATCGGTTGGAGGCTTATACCC
TCACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
accgcttaaa
Secondary structure (Cloverleaf model)
>WENV170423098	Ser	CGA
                   g      GCCA accgcttaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G C G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    A C A          C     TGGAGGCTTATACCCTCAC
                    A - T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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