The detailed information of tRNA gene sequence


Sequence ID>WENV170423130
Genome IDCEUN01317325
Search identical group
Phylum/Class[CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 225
End posion on genome 316
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aaaagtttat
tRNA gene sequence 
GGGCGGTTCGCATAGTGGCCGATTGCGCCGGGCTGTTAACCCGGAGGTGGAGAATATCCC
CCGCGCTGGTTCAAATCCAGCACCGTCCGCCA
Downstream region at tRNA end position 
aatacgatat
Secondary structure (Cloverleaf model)
>WENV170423130	Asn	GTT
                   t      GCCA aatacgatat
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     C G A C C     A
      T G A        C      | | | | |     A
    G       T A C G       G C T G G     C
    G         | | |                 T T
    C       T T G C
      C G A        G     AGGTGGAGAATATCCCCCGC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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