The detailed information of tRNA gene sequence


Sequence ID>WENV170423155
Genome IDCEUN01326841
Search identical group
Phylum/Class[CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 224
End posion on genome 127
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttcgggccgc
tRNA gene sequence 
GGAAGCGTTTGGTTGGCTGGTGCTGCCCTTGGTCTTCAAAACCAATGTGGGGCGTGAGGA
ACGTCCTGGGGGGGTTCGATTCCCCTACGTTTCCGCCA
Downstream region at tRNA end position 
tctctttaag
Secondary structure (Cloverleaf model)
>WENV170423155	SeC(p)	TCA
                   c      GCCA tctctttaag
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     C - G
                     G - C
                     T - A          T T
                    T     T C C C C     A
      C G G        T      + | | | |     G
    T       T T G G       G G G G G     C
    G         + | |                 T T
    G       T G C C
      T G C        C     TGTGGGGCGTGAGGAACGTCCTGG
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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