The detailed information of tRNA gene sequence


Sequence ID>WENV170423276
Genome IDCEUN01367749
Search identical group
Phylum/Class[CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 296
End posion on genome 204
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttctttaata
tRNA gene sequence 
GGAGGGGTCGCATAGAGGCCTAGTGCGGGCGCCTGCTAAGCGCTTGTCCGGTTTATTTCC
GGACCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
tagaacatta
Secondary structure (Cloverleaf model)
>WENV170423276	Ser	GCT
                   a      GCCA tagaacatta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TGTCCGGTTTATTTCCGGACC
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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