The detailed information of tRNA gene sequence


Sequence ID>WENV170423308
Genome IDCEUN01379722
Search identical group
Phylum/Class[CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 364
End posion on genome 268
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gctgagttga
tRNA gene sequence 
GGGGGCGGAGGGGGACTGGTGTCCTCGGCGGTCTTCAAAACCGTGCAGTCCGGCTAGAAC
CCGGACGGGTGGGTTCGATTCCCACACGTTCCCGCCA
Downstream region at tRNA end position 
gccagtaggc
Secondary structure (Cloverleaf model)
>WENV170423308	SeC	TCA
                   a      GCCA gccagtaggc
                     G - C
                     G - C
                     G - C
                     G + T
                     G + T
                     C - G
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C A        G      | | | | |     G
    G       G G G G       G T G G G     C
    G       | | + |                 T T
    T       C C T C
      G T          G     GCAGTCCGGCTAGAACCCGGACGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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