The detailed information of tRNA gene sequence


Sequence ID>WENV170423354
Genome IDCEUN01397253
Search identical group
Phylum/Class[CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1005
End posion on genome 916
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atataatctt
tRNA gene sequence 
GGAGAGGTCGCATAGTCTGGCCTAGTGCGCTCGCTTGGAAAGCGAGTATGGCGTAAGCCA
TCGTGGGTTCGAATCCCACCCTCTCCGCCT
Downstream region at tRNA end position 
tgaaattaaa
Secondary structure (Cloverleaf model)
>WENV170423354	Ser	GGA
                   t      GCCT tgaaattaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        C      | | | | |     G
  T         T A C G       G T G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        G     TATGGCGTAAGCCATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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