The detailed information of tRNA gene sequence


Sequence ID>WENV170423389
Genome IDCEUN01406596
Search identical group
Phylum/Class[CEUN] marine metagenome genome assembly TARA_124_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 665
End posion on genome 590
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgtttttga
tRNA gene sequence 
TGGTACATAGCTCAGTTGGTAGAGCGCGGCTTTCATACGGCCAAGGTCACAGGTTCAAGT
CCTGTTGTACCAACCA
Downstream region at tRNA end position 
tttgcctcgg
Secondary structure (Cloverleaf model)
>WENV170423389	Met	CAT
                   a      ACCA tttgcctcgg
                     T - A
                     G - C
                     G - C
                     T - A
                     A - T
                     C - G
                     A - T          T G
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C   A
                    G - C
                    G - C
                    C - G
                    T + G
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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