The detailed information of tRNA gene sequence


Sequence ID>WENV170424731
Genome IDCEUP01006816
Search identical group
Phylum/Class[CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 8613
End posion on genome 8537
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ctcgggttac
tRNA gene sequence 
GCCTCAGTAGCTCAGCCTGGTAGAGCATCTGATTTGTAATCAGACGGTCGGGGGTTCGAC
TCCCTCCTGGGGCTCCA
Downstream region at tRNA end position 
aattgcgact
Secondary structure (Cloverleaf model)
>WENV170424731	Thr	TGT
                   c      TCCA aattgcgact
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T
                     G - C          T C
                    T     C T C C C     A
      C G A        A      | + | | |     G
    C       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     CGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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