The detailed information of tRNA gene sequence


Sequence ID>WENV170424752
Genome IDCEUP01008461
Search identical group
Phylum/Class[CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2225
End posion on genome 2311
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
cacctgcatt
tRNA gene sequence 
GCCCCGATGGCGGAATTGGTAGACGCGGCGGATTCAAAATCCGTTTCTGGTGACAGAGTG
GGAGTTCGATTCTCCCTCGGGGCACCA
Downstream region at tRNA end position 
ttcgttccca
Secondary structure (Cloverleaf model)
>WENV170424752	Leu	CAA
                   t      ACCA ttcgttccca
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T T
                    T     C C C T C     A
      T A A        G      | | | | |     G
    T       G G C G       G G G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTCTGGTGACAGAGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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