The detailed information of tRNA gene sequence


Sequence ID>WENV170424995
Genome IDCEUP01030597
Search identical group
Phylum/Class[CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 540
End posion on genome 616
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atctcaaaat
tRNA gene sequence 
GGCCCCATAGCTCAGTTGGTTAGAGCATCCGACTCATAATCGGCAGGCCCCCTGTTCAAG
TCAGGGTGGGGCCACCA
Downstream region at tRNA end position 
tttttcttag
Secondary structure (Cloverleaf model)
>WENV170424995	Met	CAT
                   t      ACCA tttttcttag
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G G G A C     A
      T G A        A      | | | | |     A
    T       C T C G       C C C T G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGCC
                    T   C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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