The detailed information of tRNA gene sequence


Sequence ID>WENV170425042
Genome IDCEUP01035230
Search identical group
Phylum/Class[CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 63
End posion on genome 154
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgcgacatgc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAGCTCCCTGCTAAGGAGCCATACCTGGTAACGGG
TATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
cctcgctttt
Secondary structure (Cloverleaf model)
>WENV170425042	Ser	GCT
                   c      GCCA cctcgctttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CATACCTGGTAACGGGTATC
                    G - C
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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