The detailed information of tRNA gene sequence


Sequence ID>WENV170425085
Genome IDCEUP01040716
Search identical group
Phylum/Class[CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 5868
End posion on genome 5943
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgattatctt
tRNA gene sequence 
AGGAGCGTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGCGGGTTCGAAT
CCTGCCGCTCCTGCCA
Downstream region at tRNA end position 
catatttaga
Secondary structure (Cloverleaf model)
>WENV170425085	Trp	CCA
                   t      GCCA catatttaga
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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