The detailed information of tRNA gene sequence


Sequence ID>WENV170425346
Genome IDCEUP01082672
Search identical group
Phylum/Class[CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 644
End posion on genome 571
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaatattaaT
tRNA gene sequence 
AAAGGAATAATTTAATTGGTAGAATTTTACTCTCATAAGGTAATAGTGTTGGTTCGAGCC
CAGCTTCCTTCGAat
Downstream region at tRNA end position 
tttaaatgag
Secondary structure (Cloverleaf model)
>WENV170425346	Met	CAT
                   T      GAat tttaaatgag
                     A   C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          C G
                    T     C G A C C     A
      T A A        A      | + | | |     G
    T       T T T A       G T T G G     C
    G       + | | |                 T T
    G       G A A T
      T A          T     TAGT
                    T - A
                    T - A
                    A - T
                    C - G
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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