The detailed information of tRNA gene sequence


Sequence ID>WENV170429390
Genome IDCEUR01053323
Search identical group
Phylum/Class[CEUR] marine metagenome genome assembly TARA_123_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 4429
End posion on genome 4358
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCCAGAATGGTCTAGTGGTATGATTCTTGCTTTGGGTGCAAGAGGTCTCGGGTTCGATTC
CCGATTCTGGCCtta
Downstream region at tRNA end position 
cttttttata
Secondary structure (Cloverleaf model)
>WENV170429390	Pro	TGG
                   n      Ctta cttttttata
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T
                     A - T          T T
                    T     A G C C C     A
        G A        G      | | | | |     G
      T     T C T G       T C G G G     C
      G       | | +                 T T
      G     T G A T
        T A        T     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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