The detailed information of tRNA gene sequence


Sequence ID>WENV170434816
Genome IDCEUS01279557
Search identical group
Phylum/Class[CEUS] marine metagenome genome assembly TARA_125_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1019
End posion on genome 922
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aataatattt
tRNA gene sequence 
GGGAGCGGATAGGCTCGGGTGGGTCTCGCGGACTTCAAATCCGTTGTCTCCTGACCTTCG
TTAGGAGAGGTGGGTTCGACTCCCTCCCGTTCCCGCCA
Downstream region at tRNA end position 
ccgtattaca
Secondary structure (Cloverleaf model)
>WENV170434816	SeC(p)	TCA
                   t      GCCA ccgtattaca
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C
                     G - C          T C
                    A     C T C C C     A
      G C T        T      |   | | |     G
    G       C G G A       G T G G G     C
    G       | + | |                 T T
    T       G T C T
      G G          C     TGTCTCCTGACCTTCGTTAGGAGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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