The detailed information of tRNA gene sequence


Sequence ID>WENV170444286
Genome IDCEUX01083325
Search identical group
Phylum/Class[CEUX] marine metagenome genome assembly TARA_123_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 315
End posion on genome 240
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acgaacgcca
tRNA gene sequence 
GGGCTCTTAGCTCAACGGTTAGAGCTTCCGGCTCATAACCGGGAGGTTCTGGGTTCAAAT
CCCAGAGAGCCCACTA
Downstream region at tRNA end position 
tatacacaag
Secondary structure (Cloverleaf model)
>WENV170444286	Met	CAT
                   a      ACTA tatacacaag
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A          T A
                    T     G A C C C     A
      C A A        A      | | | | |     A
    G       C T C G       C T G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     AGGTT
                    T + G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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