The detailed information of tRNA gene sequence


Sequence ID>WENV170444525
Genome IDCEUX01135971
Search identical group
Phylum/Class[CEUX] marine metagenome genome assembly TARA_123_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 531
End posion on genome 457
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
catctacaac
tRNA gene sequence 
GGCGTGATGACAGAATGGTAATGTGGTGGTTTGCAAAACCATTATTCGTAGGTTCGATTC
CTACTCACGCCTCAA
Downstream region at tRNA end position 
aaaaaagact
Secondary structure (Cloverleaf model)
>WENV170444525	Cys	GCA
                   c      TCAA aaaaaagact
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C
                     A - T          T T
                    T     C A T C C     A
        A A        G      | | | | |     G
      T     G A C A       G T A G G     C
      G       | | |                 T T
      G     A T G T
        T A        G     TATTC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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