The detailed information of tRNA gene sequence


Sequence ID>WENV170445355
Genome IDCEUY01035449
Search identical group
Phylum/Class[CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1954
End posion on genome 1865
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatatctttt
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGCGCTCGCTTGGAAAGCGTGTAAGGGTTAACCCCCT
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gaaattaatt
Secondary structure (Cloverleaf model)
>WENV170445355	Ser	GGA
                   t      GCCA gaaattaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TAAGGGTTAACCCCCTTC
                    C - G
                    T   T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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