The detailed information of tRNA gene sequence


Sequence ID>WENV170447275
Genome IDCEUY01202613
Search identical group
Phylum/Class[CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 826
End posion on genome 922
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
taaatttaat
tRNA gene sequence 
GAGAATGCATGGTGTCCGGTGGCACTCTTGGTCTTCAAAACCAATGTAAGCTTACGATGT
AGGCTTTGGTAGGTTCGACTCCTGCGCATTCTCGCCA
Downstream region at tRNA end position 
taaggatgca
Secondary structure (Cloverleaf model)
>WENV170447275	SeC(p)	TCA
                   t      GCCA taaggatgca
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     C - G          T C
                    A     C G T C C     A
      C C T        T      | + | | |     G
    G       G T G G       G T A G G     C
    G       | | | +                 T T
    T       C A C T
      G G          C     TGTAAGCTTACGATGTAGGCTTTG
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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