The detailed information of tRNA gene sequence


Sequence ID>WENV170447580
Genome IDCEUY01290456
Search identical group
Phylum/Class[CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 397
End posion on genome 491
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tataattaac
tRNA gene sequence 
GGAAGCGGATGTTGTCCCGGTGGACACCACGGCCTTCAAAGCCGTTGAGGTCTAGAAATA
GGCCTGGTGGGTTCGACTCCCACACGTTTCCGCCA
Downstream region at tRNA end position 
tttcttatca
Secondary structure (Cloverleaf model)
>WENV170447580	SeC	TCA
                   c      GCCA tttcttatca
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     C - G
                     G - C
                     G   A          T C
                    A     C A C C C     A
      C C T        T      | | | | |     G
    C       G T T G       G T G G G     C
    G           | |                 T T
    G       A C A C
      T G G        C     TGAGGTCTAGAAATAGGCCTG
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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