The detailed information of tRNA gene sequence


Sequence ID>WENV170448134
Genome IDCEUY01486896
Search identical group
Phylum/Class[CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 93
End posion on genome -1
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ctttctaaat
tRNA gene sequence 
GGGAGCACATCGGTGCTGGTGTGCCGCCTGGACTTCAAATCCAGTGGGCGGATCTAAACA
ATTCGTCGGTGGGTTCGACTCCCACGTGCTCCCNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170448134	SeC(p)	TCA
                   t      NNnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T
                     C - G          T C
                    A     C A C C C     A
      T C G        T      | | | | |     G
    G       T G G C       G T G G G     C
    G       + | | |                 T T
    T       G C C G
      G T          C     TGGGCGGATCTAAACAATTCGTCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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