The detailed information of tRNA gene sequence


Sequence ID>WENV170455470
Genome IDCEVA01112753
Search identical group
Phylum/Class[CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 15968
End posion on genome 16065
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccattgaccg
tRNA gene sequence 
GGAAGCGGAAGGGGAACTGGTGTCCCCCGCGGCCTTCAAAGCCGTTGTTGTGTGCTATAA
CCACACAGGATCGGTTCGATTCCGATGCGCTTCCGCCA
Downstream region at tRNA end position 
ttcaagaagg
Secondary structure (Cloverleaf model)
>WENV170455470	SeC	TCA
                   g      GCCA ttcaagaagg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     G   G          T T
                    A     T A G C C     A
      C A A        A      | | | | |     G
    T       G G G G       A T C G G     C
    G       | | | |                 T T
    G       C C C C
      T G T        C     TGTTGTGTGCTATAACCACACAGG
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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