The detailed information of tRNA gene sequence


Sequence ID>WENV170455674
Genome IDCEVA01130558
Search identical group
Phylum/Class[CEVA] marine metagenome genome assembly TARA_125_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 381
End posion on genome 290
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aattaataat
tRNA gene sequence 
GGAGGGGTGGCAGAGTCTGGCTGATTGCACTGGTCTTGAAAACCAGCGAGGGTTTAAATC
CTCCGGGGGTTCGAATCCCTCCCCCTCCACAA
Downstream region at tRNA end position 
tgaaaatttt
Secondary structure (Cloverleaf model)
>WENV170455674	Ser	TGA
                   t      ACAA tgaaaatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G         + | | |                 T T
  G         T T G C
    C T G A        A     CGAGGGTTTAAATCCTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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